marray_hdf5.hxx File Reference

#include <H5version.h>
#include <cstring>
#include "marray.hxx"
#include <cassert>
#include <stdexcept>
#include <limits>
#include <string>
#include <sstream>
#include <iterator>
#include <vector>
#include <set>
#include <iostream>
#include <memory>
#include <numeric>
#include "hdf5.h"

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Namespaces
namespace	marray
	Runtime-flexible multi-dimensional views and arrays.
namespace	marray::hdf5
	HDF5 import/export support.
Enumerations
enum	marray::hdf5::FileAccessMode { marray::hdf5::READ_ONLY, marray::hdf5::READ_WRITE }
enum	marray::hdf5::HDF5Version { marray::hdf5::DEFAULT_HDF5_VERSION, marray::hdf5::LATEST_HDF5_VERSION }
Functions
hid_t	marray::hdf5::createFile (const std::string &filename, HDF5Version hdf5version)
	Create an HDF5 file.
hid_t	marray::hdf5::openFile (const std::string &filename, FileAccessMode fileAccessMode, HDF5Version hdf5version)
	Open an HDF5 file.
void	marray::hdf5::closeFile (const hid_t &handle)
	Close an HDF5 file.
hid_t	marray::hdf5::createGroup (const hid_t &parentHandle, const std::string &groupName)
	Create an HDF5 group.
hid_t	marray::hdf5::openGroup (const hid_t &parentHandle, const std::string &groupName)
	Open an HDF5 group.
void	marray::hdf5::closeGroup (const hid_t &handle)
	Close an HDF5 group.
template<class T >
void	marray::hdf5::save (const hid_t &groupHandle, const std::string &datasetName, const Marray< T > &in)
	Save an Marray as an HDF5 dataset.
template<class T , bool isConst>
void	marray::hdf5::save (const hid_t &groupHandle, const std::string &datasetName, const View< T, isConst > &in)
	Save a View as an HDF5 dataset.
template<class T >
void	marray::hdf5::save (const hid_t &groupHandle, const std::string &datasetName, const std::vector< T > &in)
	Save an std::vector as an HDF5 dataset.
template<class T , class BaseIterator , class ShapeIterator >
void	marray::hdf5::saveHyperslab (const hid_t &groupHandle, const std::string &datasetName, BaseIterator baseBegin, BaseIterator baseEnd, ShapeIterator shapeBegin, const Marray< T > &in)
	Save an Marray as a hyperslab into an HDF5 dataset.
template<class T , class ShapeIterator >
void	marray::hdf5::create (const hid_t &groupHandle, const std::string &datasetName, ShapeIterator begin, ShapeIterator end, CoordinateOrder coordinateOrder)
	Create and close an HDF5 dataset to store Marray data.
template<class T >
void	marray::hdf5::load (const hid_t &groupHandle, const std::string &datasetName, Marray< T > &out)
	Load an Marray from an HDF5 dataset.
template<class T >
void	marray::hdf5::loadShape (const hid_t &groupHandle, const std::string &datasetName, Vector< T > &out)
	Load the shape of an HDF5 dataset.
template<class T , class BaseIterator , class ShapeIterator >
void	marray::hdf5::loadHyperslab (const hid_t &groupHandle, const std::string &datasetName, BaseIterator baseBegin, BaseIterator baseEnd, ShapeIterator shapeBegin, Marray< T > &out)
	Load a hyperslab from an HDF5 dataset into an Marray.
Variables
const char	marray::hdf5::reverseShapeAttributeName [14] = "reverse-shape"